Posts Tagged ‘Bacteria’

Gut bacteria play a crucial role in food intolerance

Saturday, December 26th, 2009

Medicine still has no ready solution for the problem of food intolerance and, in general, doctors have shown little interest in finding one. In the absence of medical help and with no test for the condition, most patients are left to search alone, often in vain, for answers, and for whatever scant relief they can find.

A few doctors, such as allergist Prof. Jonathan Brostoff and gastroenterologist Prof. John Hunter, have taken more of an interest in this condition, and published very helpful books (The Complete Guide to Food Allergy and Intolerance and Solve your Food Intolerance respectively), but these doctors are very much the exception.

For those who don’t want to have to purchase and read their way through a book, Prof. Hunter, and agri-food scientist Karen Huntley, have recently condensed the wisdom gained from many years of clinical practice and research at the Gastroenterology Research Unit, Addenbrooke’s Hospital, Cambridge, into an online article (The Management of Multiple Food Intolerances).

The authors assert that food intolerance is caused by undigested food residues being wrongly metabolised by gut bacteria, and explain how this situation can best be managed by using means such as an elimination and/or rotation diet, a liquid elemental diet, fibre reduction, small, frequent meals, careful chewing or blending of foods and taking pancreatic enzymes and probiotics while avoiding prebiotics and antibiotics. Also discussed are the benefits of breath retraining, psychotherapy, EFT and meditation, and the merits of using laxatives and bowel washouts.

In spite of the remarkable breadth of the authors’ approach to food intolerance, this does not yet extend to the use of helminths, about which they were apparently unaware until their attention was drawn recently to my own very successful experience of using helminthic therapy for this condition (Wriggling out of food intolerance and fatigue).

Unfortunately, when doctors are made aware of this option, many tend to be extremely resistant to the idea of replacing even small, controlled doses of organisms which their training has conditioned them to perceive only in an extremely negative light. However, given Prof Hunter’s demonstration, over many years, of the critical importance of gut fauna in the development and management of food intolerance, the idea of using a few additional organisms that have a glowing therapeutic track record should not present too great a leap of imagination.

It is possible that the success of helminthic therapy in treating my own severe food intolerance may be due not just to the effect of the worms on my immune system but also to their effect on the composition and integrity of my gut microbiota, and it seems to me that the use of helminths may be a much more straightforward, powerful and elegant solution to the problem than the collection of measures which Prof. Hunter and his colleague advocate.

Give microbes to mum for less-allergic young

Friday, December 11th, 2009

Several new reports highlighting the importance of ‘friendly’ microbes have been in the news recently (exposure to germs, pets and other children may affect asthma risk; childhood exposure may prevent diseases in adulthood; bacteria are essential for skin health; and dirt keeps piglets healthy too).

Perhaps most significant, however, is new research from Germany showing that it’s literally never too early to start the young on beneficial microbes, and that they may even benefit from their mothers’ exposure during pregnancy.

It was already known that children raised on farms teeming with microbes develop fewer allergies than those raised in cities or non-farming rural areas. But children of farming mothers are less susceptible to allergies regardless of their own exposure, and the new German research has found that exposure to environmental bacteria triggers a mild inflammatory response in pregnant mice that renders their offspring more resistant to allergies.

The worm’s next success?

Monday, November 23rd, 2009

The worm is already transforming lives previously blighted by asthma, allergies and autoimmune disorders (Which diseases have responded well to helminthic therapy?).

Now, unfolding research suggests that the worm might also be effective against a diverse range of conditions that were not previously considered to have inflammatory components, including obsessive-compulsive disorder, gastric reflux, schizophrenia and aortic dissection.

Obsessive-compulsive disorder

Recently announced research indicates that the origins of pediatric obsessive-compulsive disorder (OCD), Tourette syndrome and/or tic disorder may lie in an inappropriate immune response to bacteria which cause common throat infections.

The team involved have been able to demonstrate an association between the appearance of antibodies directed against Group A beta-hemolytic streptoccoccus (GABHS) in peripheral blood and the onset of repetitive behaviors and deficits in attention, learning, and social interaction.

The revelation that antibodies alone are sufficient to trigger the onset of this behavioral syndrome will undoubtedly have medics reaching for sophisticated solutions such as intravenous immunoglobulin, or plasma exchange to remove the antibodies, in order to attenuate the autoimmune response, but the humble helminth may well do the job as effectively as any drug, and without any long term side effects.

This work may also suggest a role for helminths in treating and preventing other disorders potentially linked to autoimmunity, including mood, attentional, learning, and eating disorders, as well as autism spectrum disorders.

Schizophrenia

The provocative conclusion that a mental disorder can result from a lingering immune response inevitably makes one wonder about schizophrenia, and a Swedish study has already found that patients with recent-onset schizophrenia do in fact have higher levels of inflammatory substances in their brains.

While previous studies had analysed inflammatory factors in the blood of patients with schizophrenia, the Swedish researchers were able to examine inflammatory substances in the patients’ spinal fluid, and found raised levels of interleukin-1beta, a signal substance released in the presence of inflammation, which is not seen in anywhere near the same quantities in healthy control patients.

Interleukin-1beta is known to be able to upset the dopamine system in rats, which may explain the overactive dopamine system which has, until now, been the main focus of attention in schizophrenia in humans.

This development will inevitably raise hopes that schizophrenia may be treatable using immunotherapy, and perhaps that it might even be possible to interrupt the course of the disease at an early stage of its development.

Immunotherapy using helminths is unlikely to be considered by researchers, but these organisms would seem to be ideal candidates for the role, in view of their proven track record against inflammation and their freedom from adverse events.

Acid Reflux

According to newly released information, the common condition referred to as gastroesophageal reflux disease (GERD) might not be due to burning by stomach acid backing up into the oesophagus, as has long been thought to be the case, but by inflammation caused by immune cells in response to exposure to bile salts.

The study has shown that gastroesophageal reflux causes tissue in the oesophagus to release immune chemicals called cytokines, which, in turn attract inflammatory cells, resulting in the heartburn and chest pain that characterise GERD.

As helminths are past masters of inflammation control, their presence could potentially bring relief from GERD.

Aortic Dissection

Aortic dissection, the condition that develops when a bulge in the aorta gives way and leaks (leading to nearly 16,000 deaths annually in the US alone), was formerly thought to be the result of a simple structural failure. However, researchers appear to have uncovered biochemical processes that chip away at the aorta from within, until it finally tears, and inflammation has been revealed as the central player in this process.

Once again, one wonders whether this condition might be prevented from developing at all in someone who is hosting helminths.

Doctors blame patients for asthma treatment failure

Saturday, October 31st, 2009

And, as this article explains, they do have a point, because medication non-compliance is a considerable problem, especially as many drugs need to be taken continuously, or for a specified period of time in order to be effective.

Interrupting, or failing to complete a course of treatment can have serious consequences for the patient and can have other effects, such as encouraging the development of drug-resistant bacteria.

However, many people lead very full and busy lives, and remembering to take medication is something that may easily slip the mind in the course of a hectic day, and this is one of several reasons why I like the idea of helminthic therapy so much.

Once you have got your dose of ‘medicine’, that’s it for the lifetime of the organism employed – five years in the case of hookworm. You can then literally forget about your treatment and get on with living your life.

It can take several months for the helminths to become established and start to do whatever it is that they do, but, from then on, the benefits are none-stop, 24/7, and, in the case of asthma, this approach is proving to be over 80 per cent effective.

These personal accounts demonstrate the success of using this approach to treat asthma.

‘Friendly’ bacteria: side-lined healers

Saturday, October 24th, 2009

Of the 100 trillion ‘friendly’ bacteria, from hundreds of different species, that we each carry around in our gut, only a few may have a special role in shaping our immune responses, but one of this select group involved in immune regulation may have been found recently, in the form of a little-known bacterial species called segmented filamentous bacterium.

This ‘master’ bacterium is the first example to be found of a commensal bacterium that can simultaneously orchestrate a large spectrum of intestinal immune responses – both innate and adaptive, pro-inflammatory and regulatory – to create an immune barrier in the gut.

It can single-handedly initiate immune cell responses in mice that normally require the concerted efforts of the entire mouse microbiota and, by so doing, effectively protect mice from illness caused by an intestinal pathogen.

There is also now further evidence of the ability of ‘friendly’ gut bacteria to not only help fight infection, but also do so while maintaining a fine balance between over- and under-stimulating the immune system.

Research is also ongoing into the development of modified probiotics that can divert gut pathogens away from vulnerable intestinal cells. By adding to harmless gut bacteria molecular mimics of the sugar receptors displayed on the walls of intestinal cells, the researchers have succeeded in duping the infamous E. coli O157 pathogen into attaching to the bacteria rather than the cells, to provide 100% protection against this otherwise fatal disease.

Recent evidence to support the therapeutic use of simpler, unmodified probiotics includes Dutch research which found that treating pregnant mothers, and then their infants, with particular strains of probiotics may help prevent eczema in children with a family history of allergies.

Research conducted in China has also recently found that probiotic dietary supplementation during the winter months was a safe and effective prophylaxis against colds and influenza in children, reducing fever, rhinorrhoea and cough incidence, as well as the need for antibiotics and the number of missed school days attributable to illness. When children in the study who were taking probiotics did get fevers, coughs or runny noses, they recovered significantly faster than untreated peers.

While the Lactobacillus acidophilus and Bifidobacterium animalis strains used in this latter study were both independently effective, the best results were obtained when the two types of bacterium were combined, hinting at the possibility that the use of multiple species of organism may be preferable in the case of bacterial therapy, as it appears to be in helminthic therapy.

All this recent work adds to a substantial body of existing evidence for the therapeutic effects of probiotics, just some of which is mentioned below.

Probiotics can help fight the stomach bug Helocobacter pylori, benefit the sickest young children on antibiotics, ease antibiotic diarrhoea, and may help reduce salmonella infection.

Probiotics have been shown to be active against inflammation in models of arthritis and salmonella infection, to ease colic in breastfed babies, normalise bowel frequency in IBS patients, improve health in patients with Chronic Fatigue Syndrome, help reduce obesity, ease ulcerative colitis, and promote oral health.

Ultimately, it may be the case that many of the ills to which our own species falls prey could be amenable to the ministrations of commensal bacteria, and with less side effects than are associated with the isolated synthetic molecules which are the mainstay of medicine today.

Yet, however attractive this idea may be to those who are ill, and however encouraging the results above, the reality is that the latter constitute only a trickle when compared with the veritable torrent of research being conducted into patentable synthetic pharmaceuticals.

Currently, medicine appears to be rather less interested in pursuing probiotic research than is the food industry, for whom functional foods – including dairy products containing probiotics – are their fastest-growing product group.

Unfortunately, the dominance of the profit motive in medical research leaves little appetite for exploration of the lost world within us, so, at the present rate of progress, it could be many decades before we understand our own microbiome sufficiently to fully capitalize on the therapeutic potential of the organisms within it.

An approach which obviates the need to identify individual beneficial bacterial species is faecal bacteriotherapy, which employs the most complete mix of human-derived probiotic bacteria possible – the entire faecal flora of a healthy human being. Already shown to be successful against ulcerative colitis, this treatment should arguably be subject to further formal trials for this and other diseases.

This approach has been around for a number of years, but has failed to capture the attention of clinicians, perhaps due to the nature of the protocol (detailed here) which some may find repugnant. This is a great pity because the therapy is low-tech, low-cost, minimally invasive, and offers perhaps the ultimate bacterial probiotic.

Whilst we are forced to rely on manufacturers to provide us with probiotics in supplement form – which usually contain only one or two strains of a very limited number of bacterial species, and are invariably expensive – the all-in-one probiotic delivered by faecal bacteriotherapy is available free, and acquiring it is within the capability of any moderately adventurous and resourceful individual. Given a willing, healthy donor and some basic equipment, this procedure is ripe for self-administration, using the rectal delivery route. Anyone who can perform colonic irrigation, should be able to manage this.

This option is therefore something which those with ulcerative colitis may wish to consider, although helminthic therapy using whipworms remains the first choice for this condition, as there is already much preliminary scientific evidence supporting its use. It is also convenient and has produced excellent results in those who have tried it thus far.

Probiotic lozenges promote oral health

Tuesday, September 8th, 2009

The world’s first probiotic lozenge, designed to promote oral health by restoring the natural balance of bacteria in the mouth was GUM PerioBalance, which contains the patented ingredient Lactobacillus reuteri Prodentis.

Another probiotic lozenge is now available which its makers claim will also provide protection against the harmful bacteria that cause dental plaque by repopulating the mouth with beneficial bacteria.

Named Advanced Oral Hygiene, the new lozenge contains the probiotics S. salivarius and B. coagulans, two strains of bacteria which have been shown to help maintain healthy teeth and gums. The lozenge’s makers recommend taking the product once or twice each day after brushing one’s teeth.

There may be additional benefits from ingesting these bacteria, including a reduction in bad breath and a lowering of inflammation generally throughout the body. Studies have shown that ingestion of S. salivarius helps to reduce halitosis and also to inhibit systemic inflammatory cytokines. B. coagulans has been shown to enhance white blood cells’ surveillance for bacterial invaders, boost immune response to a simulated bacterial attack, and enhance the activity of natural killer cells.

Genetically engineered bacteria effective against IBD

Sunday, August 23rd, 2009

Researchers have genetically modified one of the trillions of bacteria that inhabit the human gut so that it will produce human growth factors which help repair the layer of cells lining the intestine, thus reducing the inflammation seen in Crohn’s disease and ulcerative colitis.

The groundbreaking aspect of this work is that the bacterium – Bacteroides ovatus – can be switched on at will by adding a plant sugar, xylan, to the patient’s diet, and switched off again by removing the sugar.

Xylan is naturally present in foods – in tree bark, rice husks, and oat kernels, for example, but in low concentrations, making it ideal as a trigger for the bacteria. Animals are able to tolerate high concentrations of xylan and have never exhibited any adverse signs from excessive xylan consumption.

This development overcomes the problem with existing bacterial and viral delivery systems, namely that they produce their drugs non-stop. As there is often a narrow concentration range at which drugs are beneficial, and beyond which treatment becomes counterproductive, control is of critical importance.

The latest study focused on mice with colitis, in which the new treatment reduced rectal bleeding, inflammation, and weight loss, and also produced faster healing of colitis-damaged tissue and an improvement in stool consistency.

Trials of the treatment should begin in humans in about 18 months. These will involve patients swallowing capsules containing the bacteria in freeze-dried form, followed, once the bugs are in place, by a drink containing xylan. The bugs will then begin to produce the protein – a human growth factor called KGF-2 – and deliver this directly to the damaged cells that line the gut.

It is hoped that, after modification, this same approach will also be able to produce different proteins which will prove to be effective for bowel disorders other than colitis and offer a solution to the often serious side effects produced by existing treatments. Initially, it may be used as an adjunct therapy to patients’ existing medicine but, eventually, it may be sufficiently successful to become a stand-alone therapy.

The same strategy could eventually be used to deliver agents to interfere with the formation of new blood vessels that feed intestinal tumors and to produce vaccine antigens to build the gut’s immunity against harmful bacteria and viruses.

Parasites shaped our immune system

Friday, August 21st, 2009

Parasites appear to have been responsible for making some of our immune proteins into the inflammatory defenders they are today but, equally, they have also sculpted some genes into risk factors for intestinal disorders.

Of 91 genes assessed in this study, 44 bore signatures of evolutionary selection, meaning that the genetic variation was due neither to chance nor to the migration of populations over time. And some of that variation correlated with the diversity of parasites that live alongside humans.

In general, parasitic worms appear to have had a more powerful influence on the development of our immune system than smaller microbes such as viruses, bacteria, and fungi, perhaps because of the slower evolution of worms.

More related research here…

Fluoroquinolone antibiotics – avoid like the plague!

Saturday, July 18th, 2009

Sometimes antibiotics are necessary, and can be a life-saver, but they are best avoided if at all possible. Over half of all antibiotics cause adverse reactions, sometimes resulting in fatalities and, even when they don’t do this, they kill good bacteria as well as bad, and inevitably encourage antibiotic-resistant bacterial strains. If you are hosting helminths for therapeutic purposes, antibiotics will also have an adverse effect on these, possibly only temporary, but sufficient to cause a return of whatever symptoms they have been acquired to treat.

Fluoroquinolone antibiotics (e.g. Levaquin, Cipro, Floxin, Tequin) are one particular type to be avoided at all costs. This group of drugs, often prescribed for mild infections such as sinusitis and urinary or prostate infections, can cause severe reactions with long-term consequences. The reactions can occur after just a few doses, can be acute, frightening, extremely painful, and can last for weeks, months or even years. Worst of all, there is no effective treatment for them.

Doctors frequently dismiss any suggestion of a connection between these effects and fluoroquinolone antibiotics, but there is clear evidence for the link. For more on Fluoroquinolone Syndrome, see FQResearch.org, Mercola.com, MedicationSense.com and FQVictins.org.

Antibiotics are often prescribed unnecessarily by doctors who feel obliged to give their patients at least something for their symptoms, but infections will usually clear up without any treatment. One particularly wise medic who I once consulted because of an infection told me, “If I treat it, it will take two weeks; if I don’t, it will take a fortnight.”

If someone is intent on treating an infection, there are natural alternatives to pharmaceutical antibiotics, which do not have any adverse side effects but which are nevertheless effective, and are worth trying first, if the condition is not life-threatening. However, many of these alternatives do have the potential to adversely affect therapeutic worm colonies.

Soil bacteria improve mood

Friday, July 17th, 2009

According to this new research, soil bacteria can produce the same jolly state of mind as antidepressant drugs, so get out into the great outdoors and breathe them in while walking in the wild and rooting around in the garden.

Probiotics may help obesity

Friday, July 17th, 2009

New research from the Stanford University School of Medicine and Stanford Hospital & Clinics suggests that taking a freely available probiotic supplement after gastric bypass surgery can help obese patients lose weight more quickly.

Having found that, at three months, the probiotics group registered a 47.6 percent weight loss, compared with 38.5 percent for the control group, the researchers recommend that gastric bypass patients take a probiotic supplement after their procedure.

For me, the most significant message which leaps off the pages of this study is that patients might benefit from taking probiotics anyway, and that, if they had been on these supplements long term, they might not have needed surgery at all. As John Morton, MD, associate professor of surgery at the medical school, said, “Part of the obesity puzzle may be due to the kind of bacteria you have in your intestine.”

AHFMR research

Friday, July 17th, 2009

AHFMR research

I recently came across an interesting series of reports on research being carried out at the Alberta Heritage Foundation for Medical Research.

Eat your worms

Derek McKay and his group are working with tapeworms to try to understand how treatment with a parasite can block inflammation, with the ultimate aim of identifying molecules that could be used as drugs to treat IBD.

Interestingly, McKay suggests the possibility that, if IBD patients were given a helminth infection to deliberately trigger the interleukin-10 response, and these worms were then eradicated, the patients’ immune systems might ‘remember’ the infection, and respond to treatment with a worm antigen, if their IBD were to flare in the future.

Eat your bacteria

Karen Madsen, who is working on how intestinal bacteria influence the development and progression of IBD, has found that both adult and pediatric patients with ulcerative colitis experienced significantly increased remission rates when given probiotic supplements, although the treatment was not as effective in Crohn’s disease.

Turning off inflammation, rebooting the immune system

Paul Beck is looking at the possibility that, in IBD, there may be no switch to turn off inflammation, with the result that T cells continue to make the inflammation steadily worse. He considers it possible that, one day, stem-cell transplants might be used to restore the normal, pre-disease state by rebooting the immune system.

Challenging the idea of autoimmunity

Controversially, Andrew Mason is challenging the widely held belief that many gastrointestinal diseases are caused by the body turning against its own cells, and suggests that at least some of these diseases may actually be of viral origin. He has already identified a virus associated with primary biliary cirrhosis (PBC), an autoimmune disease which gradually destroys the bile ducts, resulting in scarring of liver tissue, but clinical trials using antiviral therapy to treat PBC have not been conclusive.

Return of the lost worms

Tuesday, July 14th, 2009

Replacing lost worms to regain health

(This article first appeared at foodsmatter.com)

Helminthic therapy is an experimental approach to the treatment of asthma, allergies and inflammatory and autoimmune diseases, which involves the administration of controlled quantities of selected, benign intestinal parasites such as hookworm and whipworm.

The treatment developed out of understanding gained from scientific studies which showed that, while these illnesses have escalated in developed countries during the past 50-100 years, they remain much less common in parts of the world where intestinal parasites are still prevalent.

The aim of the treatment is to rebalance the host’s immune system by replacing one or more of the harmless organisms which have been lost in recent decades due to improved hygiene, sanitation and lifestyle changes.

The organisms used have become masters of the human immune system during millions of years of coexistence with man and are adept at regulating their host’s immune response. In fact, the codependent relationship between worm and man is so close that the human genome is now arguably incomplete without the genes contributed by these organisms.